Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3602
Parameters: 2 7 7 80 10 50 1000
Length:  17421

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3629--3672
23
2.0
23
90
4
72
43
2
27
27
1.67
8104--8225
22
5.3
22
62
21
61
25
29
11
33
1.91
8076--8667
47
12.6
47
94
2
876
27
30
9
32
1.88
9928--10106
85
2.1
85
98
0
349
26
27
8
37
1.85
11145--11196
25
2.1
25
85
7
70
30
32
7
28
1.85
11361--11562
39
5.2
40
84
7
238
26
26
22
24
2.00
14174--14295
22
5.3
22
62
21
61
25
29
11
33
1.91
14146--14639
47
10.6
47
92
3
693
27
29
9
33
1.88
14933--15107
56
3.1
56
97
1
334
45
9
22
22
1.81
16236--16420
79
2.3
81
84
7
236
24
22
27
25
2.00
16237--16420
40
4.6
40
83
9
216
24
22
27
25
2.00
16289--16453
79
2.1
79
84
6
210
26
21
27
25
1.99

Tables:   1

The End!