Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2271
Parameters: 2 7 7 80 10 50 1000
Length:  31938

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1866--2040
39
4.5
39
82
8
180
25
20
29
25
1.99
1818--2038
77
2.8
76
79
11
207
25
20
28
24
1.99
1819--2038
39
5.6
39
76
13
161
25
20
28
25
1.99
7198--7420
79
2.8
78
80
8
209
25
21
28
25
1.99
7198--7418
40
5.6
40
82
7
202
25
21
28
25
1.99
7278--7453
78
2.2
80
81
5
191
25
21
28
24
1.99
11120--11340
46
4.7
46
74
12
164
25
26
19
29
1.98
11031--11341
48
6.7
46
73
12
210
26
27
18
28
1.98
11126--11340
94
2.3
94
86
4
283
25
26
18
29
1.98
15890--15923
17
2.0
18
88
11
54
41
11
0
47
1.40
23830--24007
27
6.6
27
84
3
205
29
28
15
26
1.96
23851--24006
82
1.9
81
88
3
233
29
28
15
26
1.96

Tables:   1

The End!