Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2289
Parameters: 2 7 7 80 10 50 1000
Length:  43217

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3577--3620
22
2.0
22
90
0
70
25
34
4
36
1.76
13669--13706
19
2.0
19
100
0
76
21
21
21
36
1.95
20827--20866
18
2.2
18
86
4
53
12
27
0
60
1.33
21921--21955
13
2.6
13
90
4
52
20
8
0
71
1.11
21920--21961
14
3.0
14
92
0
75
23
11
0
64
1.27
22001--22040
11
3.6
11
89
0
62
12
5
10
72
1.26
22000--22044
12
3.9
12
85
11
67
13
6
11
68
1.37
29224--29288
20
3.3
19
73
16
51
38
16
21
23
1.93
41109--41150
12
3.6
12
90
6
50
76
9
2
11
1.12
41105--41152
11
4.2
12
91
2
64
66
14
4
14
1.39
41109--41150
11
3.7
11
93
3
66
76
9
2
11
1.12
41191--41239
14
3.7
13
87
12
73
71
0
10
18
1.13
42162--42207
17
2.6
17
83
12
58
69
2
19
8
1.25

Tables:   1

The End!