Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3251
Parameters: 2 7 7 80 10 50 1000
Length:  33089

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10989--11160
43
4.0
43
78
11
190
21
17
27
33
1.96
10998--11160
85
1.9
87
86
7
235
21
17
27
33
1.96
13202--13377
46
3.8
46
79
12
207
20
20
29
29
1.98
13198--13368
93
1.8
93
96
0
315
21
21
29
28
1.98
19410--19521
6
18.3
6
68
17
70
50
13
16
19
1.77
19454--19517
25
2.6
25
79
0
65
48
12
17
21
1.80
19640--19702
27
2.3
28
86
5
85
36
19
23
20
1.95
20441--20578
27
5.1
27
78
3
134
23
21
19
36
1.95
20475--20579
54
1.9
54
86
3
149
24
20
17
37
1.94
20623--20832
27
7.8
26
83
6
206
30
10
20
38
1.87
20622--20832
81
2.6
81
82
6
232
30
10
21
37
1.87
24569--24752
40
4.6
40
82
6
196
23
20
27
28
1.99
24569--24749
80
2.3
81
83
9
221
23
20
27
27
1.99
24650--24799
40
3.8
38
80
10
131
25
22
28
24
1.99
24690--24812
40
3.1
39
80
6
97
26
21
28
23
1.99
32105--32204
40
2.5
39
79
12
105
25
29
23
23
1.99

Tables:   1

The End!