Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2527
Parameters: 2 7 7 80 10 50 1000
Length:  29867

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96--142
18
2.6
18
82
0
67
72
6
10
10
1.28
150--183
9
3.7
9
92
7
59
91
0
8
0
0.43
150--185
10
3.7
10
96
3
65
88
0
11
0
0.50
2327--2364
12
3.0
12
85
14
58
71
0
7
21
1.11
2327--2363
14
2.8
14
92
8
60
72
0
5
21
1.04
9215--9354
6
22.3
6
65
8
64
69
2
20
7
1.27
9216--9309
18
5.4
18
75
7
86
69
4
19
7
1.30
9247--9366
12
9.6
12
74
14
75
71
4
18
5
1.22
9215--9369
81
1.9
83
81
6
190
68
3
20
8
1.30
9315--9352
13
2.8
13
82
17
51
73
0
18
7
1.06
9316--9366
21
2.4
21
74
6
50
74
1
17
5
1.11
9369--9431
33
1.9
33
84
12
85
55
6
25
12
1.60
29201--29244
22
2.0
22
95
0
79
25
36
4
34
1.76

Tables:   1

The End!