Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2094
Parameters: 2 7 7 80 10 50 1000
Length:  30911

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
786--846
20
2.9
21
76
14
54
47
0
8
44
1.33
1517--1578
8
8.1
8
80
10
58
33
45
0
20
1.52
1507--1575
23
3.0
21
78
15
68
33
43
1
21
1.62
1516--1561
16
3.0
16
90
6
69
36
41
0
21
1.54
1522--1580
15
3.9
15
72
12
50
33
44
0
22
1.53
1842--1964
63
2.0
62
90
1
192
50
17
0
32
1.46
2057--2089
15
2.3
15
89
5
50
36
30
3
30
1.73
2472--2772
41
7.4
40
75
8
232
31
23
21
22
1.98
2470--2755
81
3.5
80
72
11
222
30
23
22
23
1.99
2521--2738
121
1.8
121
81
4
278
30
23
22
22
1.99
4526--4575
17
2.7
20
78
18
70
10
0
44
46
1.37
9165--9214
17
2.7
20
78
18
70
10
0
44
46
1.37

Tables:   1

The End!