Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2926
Parameters: 2 7 7 80 10 50 1000
Length:  76709

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11937--11967
15
2.1
15
93
0
53
9
0
22
67
1.19
11931--11967
18
2.1
18
94
0
65
10
2
21
64
1.37
17586--17617
15
2.1
15
100
0
64
62
18
12
6
1.50
17932--18003
31
2.3
31
85
0
90
33
13
11
41
1.80
18159--18301
72
2.0
71
98
1
277
48
5
18
27
1.70
26161--26210
18
2.9
17
77
17
59
40
2
0
58
1.10
32664--32709
23
2.0
23
100
0
92
34
13
8
43
1.74
45960--46006
2
24.0
2
95
4
87
51
0
48
0
1.00
55180--55205
13
2.0
13
100
0
52
23
7
23
46
1.78
60486--60522
14
2.5
15
83
16
51
21
10
0
67
1.21
66858--66919
18
3.6
18
77
16
69
58
0
6
35
1.24
66855--66919
35
1.9
33
84
12
87
56
0
7
35
1.28
67678--67703
9
2.9
9
100
0
52
7
0
0
92
0.39
68141--68256
54
2.1
54
100
0
232
12
5
35
46
1.65
68155--68238
26
3.2
26
63
24
66
10
7
35
46
1.66
68839--69262
44
9.8
44
73
7
235
27
21
20
31
1.98
68799--69266
214
2.2
215
87
3
672
26
21
20
30
1.98
72286--72428
37
4.0
36
90
7
220
25
22
16
35
1.95
72286--72428
71
2.0
72
89
6
220
25
22
16
35
1.95
72392--72704
46
6.6
46
86
8
403
29
22
14
34
1.93
72392--72698
97
3.1
97
86
8
408
28
22
14
35
1.93
72391--72704
143
2.2
144
93
1
533
28
22
14
34
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72578--72698
52
2.3
51
84
7
152
28
23
11
36
1.90

Tables:   1

The End!