Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3069
Parameters: 2 7 7 80 10 50 1000
Length:  31834

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3126--3301
27
6.6
26
77
9
115
28
28
15
26
1.96
3146--3300
27
5.7
27
80
6
161
28
28
16
27
1.97
3146--3300
81
1.9
80
85
3
213
28
28
16
27
1.97
5960--6025
21
3.0
22
84
4
71
31
4
28
34
1.78
7010--7120
52
2.1
52
98
0
213
45
12
9
33
1.74
14127--14183
24
2.4
23
73
2
60
42
31
3
22
1.71
15932--15994
33
1.9
33
84
12
85
12
26
6
53
1.62
15992--16047
21
2.7
21
72
5
51
8
17
1
71
1.21
15991--16047
14
4.1
14
75
16
57
8
17
1
71
1.19
16009--16116
6
17.7
6
69
9
67
7
17
2
72
1.20
16009--16112
18
5.6
18
72
10
84
7
17
2
72
1.21
19558--19600
22
1.9
23
85
4
61
39
32
2
25
1.69
21308--21362
15
3.6
15
95
2
92
20
12
5
61
1.50
21308--21360
16
3.3
16
92
7
90
18
11
5
64
1.46
21404--21448
12
3.6
13
88
8
67
13
6
4
75
1.15
22438--22484
23
2.1
23
84
7
62
51
12
4
31
1.59
25198--25248
23
2.3
23
93
3
86
50
13
21
13
1.76

Tables:   1

The End!