Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2791
Parameters: 2 7 7 80 10 50 1000
Length:  74783

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1276--1304
14
2.1
14
100
0
58
27
13
6
51
1.66
5461--5529
21
3.3
21
87
2
95
11
24
8
55
1.64
7889--7982
18
5.4
18
92
3
131
28
9
25
36
1.87
16237--16264
14
2.0
14
100
0
56
14
14
0
71
1.15
16261--16334
6
13.2
6
78
18
72
33
1
17
47
1.56
16262--16338
11
7.5
11
79
15
94
33
1
18
46
1.57
16256--16334
30
2.6
30
83
13
99
32
2
16
48
1.60
16276--16337
5
12.0
5
76
17
56
33
1
17
46
1.58
16262--16338
20
3.8
21
83
16
108
33
1
18
46
1.57
24506--24567
32
1.9
32
96
0
115
38
22
9
29
1.86
28686--28729
22
2.0
22
100
0
88
54
4
22
18
1.61
30954--30997
21
2.1
21
83
8
54
63
2
9
25
1.35
40911--40938
13
2.2
13
100
0
56
50
14
7
28
1.69
48216--48277
32
1.9
32
96
0
115
29
9
22
38
1.86
56432--56505
6
13.2
6
76
21
72
47
17
1
33
1.56
56429--56490
5
12.0
5
76
17
56
46
17
1
33
1.58
56428--56504
11
7.5
11
79
15
94
46
18
1
33
1.57
56428--56504
20
3.8
21
83
16
108
46
18
1
33
1.57
56502--56528
13
2.1
13
100
0
54
70
0
14
14
1.17
56496--56545
18
3.1
18
75
21
56
64
4
10
22
1.41

Tables:   1

The End!