Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1602
Parameters: 2 7 7 80 10 50 1000
Length:  27928

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1731--1828
27
3.5
28
90
2
135
26
13
28
31
1.94
1759--1841
27
3.0
27
87
5
96
30
12
25
32
1.92
1731--1842
28
4.0
27
83
6
98
28
12
25
33
1.92
9796--9893
27
3.5
28
90
2
135
26
13
28
31
1.94
9824--9906
27
3.0
27
87
5
96
30
12
25
32
1.92
9796--9907
28
4.0
27
83
6
98
28
12
25
33
1.92
14719--14805
6
14.2
6
77
13
79
75
0
2
21
0.91
14726--14813
45
2.0
43
70
23
53
76
0
2
21
0.90
14749--14787
9
4.3
9
87
12
53
71
0
0
28
0.86
14705--14813
50
2.2
50
80
16
131
75
0
2
22
0.93
14752--14784
14
2.4
14
94
0
57
66
0
0
33
0.92
22041--22100
28
2.2
26
77
11
66
26
26
11
35
1.91
22048--22126
28
2.8
28
84
0
104
29
24
11
35
1.90

Tables:   1

The End!