Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1516
Parameters: 2 7 7 80 10 50 1000
Length:  30336

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4305--4460
82
1.9
81
85
3
215
26
16
28
28
1.97
4304--4457
55
2.9
52
82
7
175
27
16
27
27
1.97
4305--4460
27
5.7
27
81
6
163
26
16
28
28
1.97
4297--4481
27
6.8
27
75
9
101
26
16
28
29
1.97
4297--4481
82
2.3
81
78
2
210
26
16
28
29
1.97
11166--11200
13
2.8
13
95
4
63
74
0
5
20
1.02
13430--13471
17
2.4
18
80
7
52
57
4
23
14
1.56
21301--21406
53
2.0
53
100
0
212
26
22
20
30
1.98
22181--22235
15
3.8
15
85
2
69
1
21
1
74
1.01
24292--24475
40
4.6
40
82
6
196
23
20
27
28
1.99
24292--24472
80
2.3
81
83
9
221
23
20
27
27
1.99
24292--24534
40
6.1
39
76
12
122
24
20
27
26
1.99

Tables:   1

The End!