Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3407
Parameters: 2 7 7 80 10 50 1000
Length:  31099

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2020--2072
17
3.2
17
75
5
54
7
13
3
75
1.15
2020--2072
16
3.2
16
81
5
61
7
13
3
75
1.15
1982--2064
15
5.3
15
73
5
58
6
16
2
74
1.12
3087--3114
4
7.0
4
100
0
56
75
0
0
25
0.81
4465--4517
23
2.4
22
76
20
56
9
18
1
69
1.25
6837--6865
12
2.3
13
94
5
51
75
0
0
24
0.80
8965--9023
11
5.0
12
78
18
54
13
10
1
74
1.14
8969--9009
11
3.8
11
87
6
57
9
7
0
82
0.83
8969--9008
21
1.9
21
89
0
62
10
5
0
85
0.75
8969--9006
10
3.8
10
86
6
51
10
5
0
84
0.77
9324--9378
20
2.7
20
85
5
65
32
5
29
32
1.80
9347--9389
22
1.9
23
90
4
70
25
4
32
37
1.77
16016--16068
23
2.4
22
76
20
56
9
18
1
69
1.25
26730--26770
18
2.1
21
82
13
52
46
26
12
14
1.80
26827--26856
15
2.0
15
93
0
51
23
0
0
76
0.78

Tables:   1

The End!