Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3628
Parameters: 2 7 7 80 10 50 1000
Length:  41582

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6131--6393
40
6.6
40
87
3
316
24
20
28
26
1.99
6170--6428
80
3.3
80
84
3
238
25
20
28
25
1.99
10394--10434
20
1.9
23
85
14
61
48
17
9
24
1.76
19579--19722
72
2.0
72
100
0
288
50
12
5
31
1.63
19795--19907
18
6.2
18
72
4
93
40
14
9
35
1.78
19839--19986
18
7.7
19
68
16
74
41
13
10
34
1.79
20214--20238
12
2.1
12
100
0
50
40
20
24
16
1.91
20894--21015
51
2.4
52
86
2
158
27
21
10
40
1.86
21581--21644
32
2.0
32
85
8
87
46
7
0
45
1.32
32244--32387
39
3.6
40
85
4
184
23
26
24
25
2.00
33564--33639
38
2.0
38
100
0
152
31
23
13
31
1.93
40222--40401
40
4.6
40
82
2
105
23
26
24
25
2.00
40257--40401
40
3.6
40
85
4
193
23
26
24
25
2.00

Tables:   1

The End!