Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2422
Parameters: 2 7 7 80 10 50 1000
Length:  26830

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
284--462
85
2.1
85
98
0
349
37
8
27
26
1.85
1729--2319
47
12.6
47
94
2
901
33
8
29
28
1.87
2193--2269
23
3.3
24
66
14
70
33
5
28
32
1.79
4742--4816
38
2.0
38
86
5
107
30
18
26
24
1.98
4870--5265
40
10.1
40
92
2
624
24
21
28
25
1.99
4870--5265
79
5.0
80
92
2
624
24
21
28
25
1.99
4870--5265
118
3.4
119
92
2
631
24
21
28
25
1.99
6436--6614
85
2.1
85
98
0
349
37
8
27
26
1.85
7825--8329
47
10.6
47
91
3
708
33
8
29
28
1.87
7825--8329
96
5.3
95
90
3
723
33
8
29
28
1.87
12560--12704
48
3.0
48
80
4
175
40
4
17
37
1.69
24019--24057
20
1.9
20
84
5
51
35
2
10
51
1.50

Tables:   1

The End!