Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2209
Parameters: 2 7 7 80 10 50 1000
Length:  44071

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5372--5522
28
5.4
28
91
1
223
27
11
27
33
1.92
9636--9675
21
2.0
20
90
5
62
72
0
2
25
0.97
9664--9688
5
5.0
5
100
0
50
60
0
0
40
0.97
18608--19375
382
2.0
383
94
0
1349
35
18
7
38
1.80
19469--19510
20
2.1
20
86
0
57
40
7
2
50
1.43
20265--20298
9
3.7
9
88
4
50
55
2
0
41
1.15
24983--25088
29
3.7
28
73
10
90
29
33
12
25
1.92
24997--25095
29
3.4
29
81
1
119
31
33
10
25
1.89
24982--25095
58
2.0
57
86
5
158
29
33
11
25
1.91
26545--26576
16
2.0
16
93
0
55
21
6
21
50
1.71
29285--29334
18
2.5
19
81
15
57
14
38
30
18
1.89
34512--34695
40
4.7
40
81
9
191
25
21
26
26
2.00
41839--41966
39
3.2
39
85
8
152
25
28
21
24
1.99

Tables:   1

The End!