Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2493
Parameters: 2 7 7 80 10 50 1000
Length:  23149

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
830--861
16
1.9
17
93
6
57
0
9
3
87
0.64
827--863
9
4.0
9
86
6
56
0
10
2
86
0.67
827--863
19
2.0
19
89
5
58
0
10
2
86
0.67
1468--1495
13
2.2
13
100
0
56
14
25
14
46
1.82
3931--4027
30
3.2
30
72
8
99
28
16
26
27
1.97
6165--6195
12
2.6
12
100
0
62
25
16
12
45
1.83
6255--6304
6
8.2
6
81
16
50
2
20
2
76
0.99
6244--6314
37
1.9
37
86
11
101
4
18
1
76
1.03
7152--7200
20
2.5
20
86
3
64
18
6
4
71
1.23
7169--7207
10
3.9
10
86
0
60
15
2
2
79
0.95
7165--7206
20
2.1
20
100
0
84
14
4
4
76
1.12
8911--9067
30
5.2
30
73
7
149
28
17
26
27
1.97
8911--9066
60
2.6
60
96
2
287
28
17
26
27
1.98
14717--14806
33
2.8
32
69
17
94
13
21
0
65
1.26

Tables:   1

The End!