Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3215
Parameters: 2 7 7 80 10 50 1000
Length:  28995

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7828--7966
44
3.2
44
65
11
122
27
24
23
25
2.00
7860--7997
43
3.2
43
67
15
129
27
20
25
26
1.99
7824--8163
88
3.9
89
85
5
387
29
22
22
25
1.99
8351--8674
44
7.6
42
70
12
196
31
21
21
25
1.98
8472--8635
46
3.7
45
75
12
160
32
21
21
24
1.98
8521--8658
43
3.2
43
74
10
163
30
25
20
23
1.98
8513--8720
87
2.5
85
91
3
323
30
21
23
25
1.99
9459--9498
20
2.0
20
85
9
55
55
25
17
2
1.55
14311--14362
27
2.0
26
84
3
68
44
7
7
40
1.62
15279--15312
7
4.9
7
100
0
68
29
0
26
44
1.55
16204--16229
13
2.0
13
100
0
52
30
0
30
38
1.58
20657--20725
3
24.0
3
78
8
54
34
8
0
56
1.30
20667--20717
15
3.5
15
84
10
70
35
11
0
52
1.38
22933--22976
19
2.3
20
84
7
56
27
20
11
40
1.86
27079--27257
86
2.1
85
89
3
279
28
22
22
26
1.99
27248--27441
96
2.0
94
93
3
327
30
18
22
28
1.97
27473--27753
93
3.0
93
90
8
450
29
19
22
28
1.98
27566--27981
221
1.9
221
91
6
684
28
20
21
29
1.98
27806--27971
90
1.9
87
94
3
296
28
20
21
28
1.98
28290--28466
43
4.1
43
64
11
121
27
19
25
27
1.99
27894--28604
127
5.6
128
83
10
826
28
20
23
27
1.99

Tables:   1

The End!