Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3089
Parameters: 2 7 7 80 10 50 1000
Length:  28104

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
783--1021
41
5.8
40
74
12
191
23
26
25
25
2.00
2647--2809
44
3.6
43
73
15
134
28
26
22
22
1.99
10122--10293
93
1.8
93
96
0
317
27
29
21
20
1.98
10115--10290
46
3.8
46
79
12
216
28
29
21
20
1.98
11834--11923
38
2.4
38
96
3
164
32
27
15
24
1.95
17385--17608
40
5.7
40
86
6
296
24
22
27
25
2.00
17385--17608
78
2.8
80
84
8
296
24
22
27
25
2.00
25327--25550
40
5.7
40
86
6
296
24
22
27
25
2.00
25327--25550
79
2.8
80
86
6
296
24
22
27
25
2.00
25334--25583
79
3.2
79
83
7
251
26
21
26
25
1.99

Tables:   1

The End!