Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1983
Parameters: 2 7 7 80 10 50 1000
Length:  72718

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3910--3941
5
6.4
5
100
0
64
18
21
18
40
1.91
8714--8743
7
4.4
7
95
4
53
26
0
0
73
0.84
13604--13674
4
17.2
4
71
11
54
4
25
5
64
1.33
13604--13706
50
2.1
50
92
3
172
6
25
6
61
1.46
13699--13729
14
2.2
14
94
0
53
22
16
0
61
1.34
14759--14791
15
2.2
15
100
0
66
54
18
15
12
1.71
18615--18652
5
7.4
5
88
5
58
81
0
2
15
0.80
26920--26956
11
3.5
11
92
3
58
75
0
8
16
1.02
28825--28872
18
2.7
18
75
15
55
45
2
4
47
1.33
34889--34929
6
6.5
6
83
10
55
78
4
0
17
0.93
34892--34931
20
2.0
20
90
0
62
75
7
0
17
1.03
38934--38976
19
2.3
20
80
15
56
39
0
2
58
1.11
39141--39175
18
1.9
18
100
0
70
40
0
2
57
1.14
39397--39453
20
2.8
21
71
10
55
61
0
3
35
1.13
41932--41971
22
1.9
22
90
10
66
60
5
5
30
1.40
49615--49647
6
5.5
6
96
0
57
21
0
48
30
1.50
51119--51153
9
3.8
9
88
7
52
60
0
0
40
0.97
51308--51368
30
2.0
30
100
0
122
22
6
19
50
1.70
52379--52426
22
2.2
22
85
7
62
64
2
4
29
1.23
54323--54358
12
3.0
12
87
0
54
27
0
30
41
1.56
60290--60315
6
4.3
6
100
0
52
84
15
0
0
0.62

Tables:   1

The End!