Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3183
Parameters: 2 7 7 80 10 50 1000
Length:  29766

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1218--1280
33
1.9
33
84
12
85
12
25
6
55
1.60
1278--1333
21
2.7
21
72
5
51
8
17
1
71
1.21
1277--1333
14
4.1
14
75
16
57
8
17
1
71
1.19
1340--1397
18
3.3
18
82
2
73
5
13
6
74
1.20
1372--1401
11
2.7
11
100
0
60
0
10
6
83
0.81
1295--1401
6
17.7
6
68
7
65
6
17
3
71
1.22
2436--2495
24
2.4
25
86
5
77
6
15
5
73
1.22
2436--2494
26
2.3
27
88
5
86
6
15
3
74
1.16
2452--2507
11
5.0
11
75
12
51
8
10
3
76
1.12
2453--2520
35
1.9
35
85
8
93
11
10
2
75
1.16
4490--4522
16
2.1
16
94
0
57
27
6
6
60
1.44
22111--22150
19
2.1
19
85
0
53
25
35
17
22
1.95
22563--22609
20
2.3
20
85
0
67
29
36
12
21
1.91
24138--24173
9
3.9
9
92
3
54
91
0
8
0
0.41
24124--24176
11
5.0
11
77
9
65
84
1
11
1
0.77
24126--24182
11
5.4
11
79
8
64
82
1
12
3
0.87
24124--24182
20
2.8
20
84
5
82
83
1
11
3
0.85
25201--25306
48
2.2
47
85
9
135
59
1
24
14
1.45
26976--27022
20
2.3
20
85
0
67
29
36
12
21
1.91

Tables:   1

The End!