Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1337
Parameters: 2 7 7 80 10 50 1000
Length:  37367

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
588--623
18
1.9
19
94
5
65
36
5
13
44
1.68
6625--6875
40
6.3
40
89
2
337
28
27
20
23
1.99
15076--15321
40
6.2
40
89
2
318
29
28
19
22
1.98
18771--18817
20
2.3
20
82
7
60
23
34
17
25
1.96
24586--24627
11
3.7
11
81
12
50
73
7
4
14
1.21
24584--24626
22
2.0
22
90
9
70
69
9
4
16
1.31
24672--24720
13
3.5
15
83
13
68
71
0
8
20
1.11
24667--24720
27
2.0
27
89
7
83
64
0
11
24
1.25
24667--24718
12
4.0
13
81
13
63
63
0
11
25
1.28
25645--25689
18
2.5
17
82
13
54
73
4
15
6
1.21
25643--25694
18
2.8
18
75
16
52
67
3
19
9
1.35
28852--28891
11
3.8
10
90
9
62
80
7
2
10
1.00
28852--28892
10
3.7
11
83
9
57
80
7
2
9
0.99
28929--28956
14
2.0
14
100
0
56
64
0
14
21
1.29
34026--34079
24
2.2
25
78
15
60
11
22
3
62
1.43
36328--36376
12
4.0
12
94
2
80
16
8
0
75
1.03
36331--36377
13
3.7
13
91
8
71
12
6
0
80
0.88

Tables:   1

The End!