Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2852
Parameters: 2 7 7 80 10 50 1000
Length:  22161

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1393--1430
3
13.0
3
84
15
53
65
0
0
34
0.93
3219--3253
13
2.7
13
86
0
52
62
2
8
25
1.38
3598--3632
14
2.5
14
90
0
52
54
2
22
20
1.58
3722--3861
74
1.9
74
89
2
219
30
21
20
28
1.98
3920--4150
69
3.2
69
77
9
228
33
22
17
26
1.96
4149--4175
14
1.9
14
100
0
54
51
7
14
25
1.68
16912--16948
3
12.0
3
88
5
56
67
0
0
32
0.91
18718--18932
89
2.4
92
78
6
228
34
16
14
33
1.89
18858--19008
72
2.1
71
81
6
171
34
18
17
29
1.94
19137--19171
14
2.5
14
90
0
52
54
2
22
20
1.58
19261--19400
74
1.9
74
89
2
219
30
21
20
28
1.98
19462--19688
69
3.2
70
78
7
231
33
22
17
26
1.96
19687--19713
14
1.9
14
100
0
54
51
7
14
25
1.68
19694--19838
72
2.0
75
86
6
208
34
20
17
28
1.95

Tables:   1

The End!