Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1158
Parameters: 2 7 7 80 10 50 1000
Length:  23069

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
725--941
96
2.3
93
81
6
240
28
20
27
23
1.99
725--941
46
4.6
47
73
7
172
28
20
27
23
1.99
765--941
94
1.9
95
84
2
239
27
20
28
23
1.99
5331--5508
27
6.6
27
83
3
205
26
15
28
29
1.96
5332--5487
82
1.9
81
88
3
233
26
15
28
29
1.96
5328--5508
82
2.2
81
83
2
229
27
15
27
29
1.96
13451--13628
27
6.6
27
83
3
205
26
15
28
29
1.96
13452--13607
82
1.9
81
88
3
233
26
15
28
29
1.96
13448--13628
82
2.2
81
83
2
229
27
15
27
29
1.96
17073--17247
87
2.0
86
92
6
291
25
21
26
26
2.00
21553--21730
27
6.6
27
83
3
205
26
15
28
29
1.96
21554--21709
82
1.9
81
88
3
233
26
15
28
29
1.96
21550--21730
82
2.2
81
83
2
229
27
15
27
29
1.96

Tables:   1

The End!