Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2855
Parameters: 2 7 7 80 10 50 1000
Length:  70927

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3293--3348
29
2.0
28
85
3
76
23
25
23
28
1.99
10224--10447
40
5.6
40
85
6
226
25
27
21
26
1.99
10224--10448
80
2.8
79
80
8
251
25
27
21
26
1.99
13705--13926
94
2.4
92
81
7
243
24
30
18
26
1.98
13705--13924
46
4.7
45
72
13
135
24
30
19
26
1.98
14586--14610
12
2.1
12
100
0
50
60
16
8
16
1.58
31297--31389
47
2.0
47
100
0
186
43
2
17
37
1.61
32675--32711
18
2.1
18
100
0
74
27
18
16
37
1.92
46808--46925
43
2.8
42
74
2
110
33
23
17
25
1.97
49287--49329
21
2.0
21
90
0
68
58
4
4
32
1.39
56650--56818
48
3.6
47
87
2
232
30
15
21
31
1.95
56795--56868
37
2.0
37
86
0
103
27
14
27
31
1.95
64461--64508
25
1.9
25
86
0
69
33
25
16
25
1.96
64547--64603
9
5.9
9
73
15
51
35
8
21
35
1.84
64545--64615
20
3.5
20
94
0
124
35
11
21
32
1.89
64556--64610
11
5.4
11
70
16
55
36
12
20
30
1.90
64661--64779
24
5.0
24
92
5
188
29
21
21
26
1.99
64969--65032
31
2.1
31
90
0
101
35
15
23
25
1.94

Tables:   1

The End!