Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1309
Parameters: 2 7 7 80 10 50 1000
Length:  45510

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3174--3276
30
3.4
29
72
9
91
31
16
26
26
1.97
5174--5206
12
2.8
12
86
4
50
54
9
0
36
1.32
9708--9892
79
2.3
81
80
8
209
25
27
21
24
1.99
9689--9892
40
5.1
40
80
8
211
25
27
21
25
1.99
11772--11802
16
1.9
16
93
0
53
19
6
22
51
1.69
14725--14780
21
2.8
20
83
2
67
17
25
19
37
1.94
15005--15033
13
2.2
13
100
0
58
27
0
10
62
1.28
19663--19691
13
2.2
13
100
0
58
27
0
10
62
1.28
26925--26997
29
2.6
27
76
14
76
15
20
0
64
1.29
26939--26972
18
1.9
18
88
5
52
23
20
0
55
1.43
27867--27931
31
2.1
31
83
13
82
4
20
4
70
1.23
27936--27975
16
2.6
15
92
4
62
22
7
0
70
1.12
35428--35601
46
3.8
46
79
8
201
27
29
21
21
1.98
35436--35606
92
1.8
92
93
1
297
26
30
21
21
1.98
37975--38021
14
3.3
14
93
3
76
61
12
14
10
1.56
37975--38035
27
2.2
27
83
13
72
60
13
14
11
1.59
37984--38033
14
3.7
13
89
10
50
58
12
16
14
1.64
40949--41122
95
1.8
95
96
0
321
27
29
21
21
1.98
40941--41118
46
3.8
46
80
12
227
28
29
20
21
1.98
45248--45287
19
2.1
19
85
0
53
25
35
17
22
1.95

Tables:   1

The End!