Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2068
Parameters: 2 7 7 80 10 50 1000
Length:  15016

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1889--1944
28
2.0
29
82
3
69
53
1
1
42
1.21
3274--3316
18
2.4
18
92
0
68
37
0
9
53
1.33
3274--3316
6
7.2
6
86
0
59
37
0
9
53
1.33
3469--3527
27
2.3
27
83
11
72
38
0
30
30
1.57
3670--3765
39
2.5
39
80
6
108
20
23
28
27
1.99
9725--9780
28
2.0
29
82
3
69
53
1
1
42
1.21
11115--11156
6
7.2
6
81
5
50
35
0
9
54
1.33
11128--11156
12
2.4
12
100
0
58
34
0
6
58
1.25
11309--11367
27
2.3
27
83
11
72
38
0
30
30
1.57
11511--11606
39
2.5
39
80
6
108
20
23
28
27
1.99
14277--14375
52
2.0
52
80
11
118
45
6
2
46
1.39
14332--14365
17
2.0
17
94
0
59
44
5
0
50
1.26
14337--14384
17
3.0
16
79
17
55
45
6
2
45
1.40
14425--14458
17
2.0
17
88
0
50
41
0
0
58
0.98
14438--14484
24
2.0
24
86
0
67
38
0
0
61
0.96
14434--14482
17
3.0
17
75
19
50
40
0
0
59
0.98
14374--14586
115
1.8
117
92
6
362
42
2
5
49
1.39
14530--14792
140
1.8
145
91
5
448
46
3
3
47
1.35
14871--14965
45
2.1
45
88
1
138
32
27
5
34
1.79
14944--14976
16
2.1
16
94
0
57
30
36
0
33
1.58
14957--14999
21
2.0
21
95
0
77
34
37
0
27
1.57

Tables:   1

The End!