Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold977
Parameters: 2 7 7 80 10 50 1000
Length:  29675

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
388--509
53
2.2
56
84
5
160
33
28
11
26
1.91
389--509
28
4.4
28
86
6
158
33
28
11
26
1.91
8672--8794
28
4.4
28
88
2
167
33
27
12
26
1.92
12056--12193
50
2.6
50
80
8
143
26
28
19
25
1.99
14139--14217
34
2.3
34
80
6
88
30
20
21
27
1.98
14681--14827
27
5.4
27
88
0
213
20
14
19
44
1.86
15059--15114
20
2.9
19
82
12
53
19
42
21
16
1.89
18180--18237
27
2.1
27
81
6
64
18
12
31
37
1.88
18194--18307
27
4.2
27
82
4
131
18
12
21
48
1.80
18565--18602
20
1.9
20
94
0
67
18
34
23
23
1.96
21710--21887
27
6.6
27
84
3
205
29
28
15
26
1.96
21731--21886
82
1.9
81
88
3
233
29
28
15
26
1.96

Tables:   1

The End!