Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold2456
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 31401
ACGTcount: A:0.31, C:0.18, G:0.18, T:0.33
Found at i:4322 original size:18 final size:19
Alignment explanation
Indices: 4282--4322 Score: 50
Period size: 17 Copynumber: 2.2 Consensus size: 19
4272 GTTGTAAAGT
*
4282 TTTATTTTATTTTTATTTA
1 TTTATTTTATTTTTACTTA
4301 TTTA-TTTA-TTTTACTTA
1 TTTATTTTATTTTTACTTA
4318 GTTTA
1 -TTTA
4323 AATTTTTATG
Statistics
Matches: 20, Mismatches: 1, Indels: 3
0.83 0.04 0.12
Matches are distributed among these distances:
17 8 0.40
18 8 0.40
19 4 0.20
ACGTcount: A:0.22, C:0.02, G:0.02, T:0.73
Consensus pattern (19 bp):
TTTATTTTATTTTTACTTA
Found at i:8077 original size:4 final size:4
Alignment explanation
Indices: 8068--8099 Score: 64
Period size: 4 Copynumber: 8.0 Consensus size: 4
8058 AAGTTTTATT
8068 TTTA TTTA TTTA TTTA TTTA TTTA TTTA TTTA
1 TTTA TTTA TTTA TTTA TTTA TTTA TTTA TTTA
8100 CTTAGTTTAA
Statistics
Matches: 28, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
4 28 1.00
ACGTcount: A:0.25, C:0.00, G:0.00, T:0.75
Consensus pattern (4 bp):
TTTA
Found at i:9932 original size:11 final size:12
Alignment explanation
Indices: 9880--9937 Score: 64
Period size: 12 Copynumber: 4.7 Consensus size: 12
9870 GTATTGGAGT
9880 AAAAAAAA-TCA
1 AAAAAAAATTCA
*
9891 AAAAAAAATTCG
1 AAAAAAAATTCA
*
9903 AAAAAAAATTGA
1 AAAAAAAATTCA
9915 TTGAAAAAAAATTCA
1 ---AAAAAAAATTCA
9930 AAAAAAAA
1 AAAAAAAA
9938 AGTGAAAAAA
Statistics
Matches: 39, Mismatches: 4, Indels: 7
0.78 0.08 0.14
Matches are distributed among these distances:
11 8 0.21
12 20 0.51
15 11 0.28
ACGTcount: A:0.74, C:0.05, G:0.05, T:0.16
Consensus pattern (12 bp):
AAAAAAAATTCA
Found at i:9963 original size:30 final size:29
Alignment explanation
Indices: 9929--9992 Score: 76
Period size: 30 Copynumber: 2.1 Consensus size: 29
9919 AAAAAAATTC
*
9929 AAAAAAAAAAGTGAAAAAAA-TCGAGCAAAA
1 AAAAAAAAAAG-AAAAAAAAGT-GAGCAAAA
*
9959 AAAAAGAAAAGAAAAAAAAGGTGAGCAAAA
1 AAAAAAAAAAGAAAAAAAA-GTGAGCAAAA
9989 AAAA
1 AAAA
9993 TCAAGTTTAA
Statistics
Matches: 30, Mismatches: 2, Indels: 4
0.83 0.06 0.11
Matches are distributed among these distances:
29 7 0.23
30 22 0.73
31 1 0.03
ACGTcount: A:0.75, C:0.05, G:0.16, T:0.05
Consensus pattern (29 bp):
AAAAAAAAAAGAAAAAAAAGTGAGCAAAA
Found at i:11023 original size:6 final size:6
Alignment explanation
Indices: 11014--11144 Score: 59
Period size: 6 Copynumber: 20.7 Consensus size: 6
11004 GAAAGAGATT
* * **
11014 GAAAAA GAAATGAAA GAAAACA -AAAA- GAAAAC GAAGAA GAAAAA GAAATT
1 GAAAAA GAAA--A-A GAAAA-A GAAAAA GAAAAA GAAAAA GAAAAA GAAAAA
* ** ** * *
11064 GCAAAA GAAAAA GAAATC GAAAAA GTGAGA GAAAAA GAAAAT GAAGAAAA
1 GAAAAA GAAAAA GAAAAA GAAAAA GAAAAA GAAAAA GAAAAA G-A-AAAA
*
11114 GAAAATT GAAAAA GAAAAA GCGAAAAA GAAA
1 GAAAA-A GAAAAA GAAAAA --GAAAAA GAAA
11145 TTGAAAGAGA
Statistics
Matches: 91, Mismatches: 24, Indels: 20
0.67 0.18 0.15
Matches are distributed among these distances:
5 4 0.04
6 62 0.68
7 9 0.10
8 11 0.12
9 5 0.05
ACGTcount: A:0.70, C:0.04, G:0.20, T:0.06
Consensus pattern (6 bp):
GAAAAA
Found at i:11040 original size:11 final size:12
Alignment explanation
Indices: 11026--11144 Score: 73
Period size: 12 Copynumber: 9.6 Consensus size: 12
11016 AAAAGAAATG
11026 AAAGAAAAC-AA
1 AAAGAAAACGAA
11037 AAAGAAAACGAA
1 AAAGAAAACGAA
* *
11049 GAAGAAAAAGAA
1 AAAGAAAACGAA
**
11061 ATTGCAAAA-GAA
1 AAAG-AAAACGAA
*
11073 AAAGAAATCGAA
1 AAAGAAAACGAA
* *
11085 AAAGTGAGA-GAA
1 AAAG-AAAACGAA
*
11097 AAAGAAAATGAAGA
1 AAAGAAAACG-A-A
*
11111 AAAGAAAATTGAA
1 AAAGAAAA-CGAA
11124 AAAGAAAAAGCGAA
1 AAAG-AAAA-CGAA
11138 AAAGAAA
1 AAAGAAA
11145 TTGAAAGAGA
Statistics
Matches: 84, Mismatches: 15, Indels: 16
0.73 0.13 0.14
Matches are distributed among these distances:
11 14 0.17
12 33 0.39
13 14 0.17
14 21 0.25
15 2 0.02
ACGTcount: A:0.71, C:0.04, G:0.19, T:0.06
Consensus pattern (12 bp):
AAAGAAAACGAA
Found at i:11087 original size:18 final size:18
Alignment explanation
Indices: 11030--11088 Score: 73
Period size: 18 Copynumber: 3.3 Consensus size: 18
11020 GAAATGAAAG
* *
11030 AAAACAAAAAGAAAACGA
1 AAAAGAAAAAGAAATCGA
* * *
11048 AGAAGAAAAAGAAATTGC
1 AAAAGAAAAAGAAATCGA
11066 AAAAGAAAAAGAAATCGA
1 AAAAGAAAAAGAAATCGA
11084 AAAAG
1 AAAAG
11089 TGAGAGAAAA
Statistics
Matches: 33, Mismatches: 8, Indels: 0
0.80 0.20 0.00
Matches are distributed among these distances:
18 33 1.00
ACGTcount: A:0.71, C:0.07, G:0.17, T:0.05
Consensus pattern (18 bp):
AAAAGAAAAAGAAATCGA
Found at i:11115 original size:14 final size:13
Alignment explanation
Indices: 11094--11150 Score: 55
Period size: 14 Copynumber: 4.3 Consensus size: 13
11084 AAAAGTGAGA
11094 GAAAAAGAAAA-T
1 GAAAAAGAAAATT
11106 GAAGAAAAGAAAATT
1 G-A-AAAAGAAAATT
**
11121 GAAAAAGAAAAAGC
1 GAAAAAG-AAAATT
11135 GAAAAAG-AAATT
1 GAAAAAGAAAATT
11147 GAAA
1 GAAA
11151 GAGAGCTTGA
Statistics
Matches: 37, Mismatches: 4, Indels: 8
0.76 0.08 0.16
Matches are distributed among these distances:
12 8 0.22
13 6 0.16
14 21 0.57
15 2 0.05
ACGTcount: A:0.70, C:0.02, G:0.19, T:0.09
Consensus pattern (13 bp):
GAAAAAGAAAATT
Found at i:13019 original size:20 final size:20
Alignment explanation
Indices: 12973--13019 Score: 67
Period size: 20 Copynumber: 2.4 Consensus size: 20
12963 AGCTCGTTTC
*
12973 CAGCTCACTCGAGCTCAAGT
1 CAGCTCACTCAAGCTCAAGT
* *
12993 CAACTCACTCAAGCTCAATT
1 CAGCTCACTCAAGCTCAAGT
13013 CAGCTCA
1 CAGCTCA
13020 ATCTTAACCC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
20 23 1.00
ACGTcount: A:0.30, C:0.36, G:0.13, T:0.21
Consensus pattern (20 bp):
CAGCTCACTCAAGCTCAAGT
Found at i:17135 original size:10 final size:10
Alignment explanation
Indices: 17120--17181 Score: 52
Period size: 10 Copynumber: 5.9 Consensus size: 10
17110 TTTGAACCGT
*
17120 TACCAATTCG
1 TACCAATTCA
*
17130 TACCAAATACCA
1 TACC-AAT-TCA
*
17142 TACCATTTCA
1 TACCAATTCA
17152 TACCAATTCCA
1 TACCAATT-CA
* *
17163 TACCATTTCG
1 TACCAATTCA
17173 TACCAATTC
1 TACCAATTC
17182 CCAAATACCA
Statistics
Matches: 41, Mismatches: 8, Indels: 6
0.75 0.15 0.11
Matches are distributed among these distances:
10 22 0.54
11 14 0.34
12 5 0.12
ACGTcount: A:0.34, C:0.32, G:0.03, T:0.31
Consensus pattern (10 bp):
TACCAATTCA
Found at i:17165 original size:21 final size:21
Alignment explanation
Indices: 17120--17182 Score: 90
Period size: 21 Copynumber: 3.0 Consensus size: 21
17110 TTTGAACCGT
* *
17120 TACCAATTCGTACCAAATACCA
1 TACCATTTCGTACC-AATTCCA
*
17142 TACCATTTCATACCAATTCCA
1 TACCATTTCGTACCAATTCCA
17163 TACCATTTCGTACCAATTCC
1 TACCATTTCGTACCAATTCC
17183 CAAATACCAA
Statistics
Matches: 37, Mismatches: 4, Indels: 1
0.88 0.10 0.02
Matches are distributed among these distances:
21 25 0.68
22 12 0.32
ACGTcount: A:0.33, C:0.33, G:0.03, T:0.30
Consensus pattern (21 bp):
TACCATTTCGTACCAATTCCA
Found at i:18163 original size:33 final size:33
Alignment explanation
Indices: 18125--18187 Score: 85
Period size: 33 Copynumber: 1.9 Consensus size: 33
18115 GATTACTCAC
18125 TTCACTCG-TTTCTTTT-ACAGACTCTCTTTCTTT
1 TTCACTCGATTTCTTTTCA-AG-CTCTCTTTCTTT
*
18158 TTCACTTGATTTCTTTTCAAGCTCTCTTTC
1 TTCACTCGATTTCTTTTCAAGCTCTCTTTC
18188 AATTTCTTTT
Statistics
Matches: 27, Mismatches: 1, Indels: 4
0.84 0.03 0.12
Matches are distributed among these distances:
33 16 0.59
34 10 0.37
35 1 0.04
ACGTcount: A:0.13, C:0.27, G:0.06, T:0.54
Consensus pattern (33 bp):
TTCACTCGATTTCTTTTCAAGCTCTCTTTCTTT
Found at i:18214 original size:21 final size:21
Alignment explanation
Indices: 18185--18240 Score: 51
Period size: 21 Copynumber: 2.7 Consensus size: 21
18175 CAAGCTCTCT
*
18185 TTCAATTTCTTTTTTCGCTTT-
1 TTCATTTTCTTTTTTC-CTTTC
* ** *
18206 TTCTTTTTCAATTTTCTTTTC
1 TTCATTTTCTTTTTTCCTTTC
18227 TTCATTTTCTTTTT
1 TTCATTTTCTTTTT
18241 CTCTCACTTT
Statistics
Matches: 26, Mismatches: 8, Indels: 2
0.72 0.22 0.06
Matches are distributed among these distances:
20 3 0.12
21 23 0.88
ACGTcount: A:0.09, C:0.18, G:0.02, T:0.71
Consensus pattern (21 bp):
TTCATTTTCTTTTTTCCTTTC
Found at i:18233 original size:14 final size:14
Alignment explanation
Indices: 18184--18240 Score: 57
Period size: 14 Copynumber: 4.1 Consensus size: 14
18174 TCAAGCTCTC
18184 TTTCAA-TTTCTTT
1 TTTCAATTTTCTTT
**
18197 TTTCGCTTTT-TCTT
1 TTTCAATTTTCT-TT
18211 TTTCAATTTTCTTT
1 TTTCAATTTTCTTT
18225 TCTTC-ATTTTCTTT
1 T-TTCAATTTTCTTT
18239 TT
1 TT
18241 CTCTCACTTT
Statistics
Matches: 36, Mismatches: 4, Indels: 8
0.75 0.08 0.17
Matches are distributed among these distances:
13 6 0.17
14 26 0.72
15 4 0.11
ACGTcount: A:0.09, C:0.18, G:0.02, T:0.72
Consensus pattern (14 bp):
TTTCAATTTTCTTT
Found at i:18268 original size:18 final size:18
Alignment explanation
Indices: 18247--18340 Score: 77
Period size: 18 Copynumber: 5.4 Consensus size: 18
18237 TTTTCTCTCA
*
18247 CTTTTTTGATTTCTTTTT
1 CTTTTTCGATTTCTTTTT
* *
18265 CTTTTGCAATTTCTTTTT
1 CTTTTTCGATTTCTTTTT
*
18283 CTTTTTCGTTTTCTTTTT
1 CTTTTTCGATTTCTTTTT
* **
18301 -GTTTTC--TTTCAATTT
1 CTTTTTCGATTTCTTTTT
* *
18316 CTTTTTCAATCTCTTTTT
1 CTTTTTCGATTTCTTTTT
*
18334 CCTTTTC
1 CTTTTTC
18341 TCGCTCAATG
Statistics
Matches: 59, Mismatches: 14, Indels: 6
0.75 0.18 0.08
Matches are distributed among these distances:
15 7 0.12
16 5 0.08
17 5 0.08
18 42 0.71
ACGTcount: A:0.07, C:0.18, G:0.04, T:0.70
Consensus pattern (18 bp):
CTTTTTCGATTTCTTTTT
Found at i:18322 original size:6 final size:6
Alignment explanation
Indices: 18202--18309 Score: 67
Period size: 6 Copynumber: 17.7 Consensus size: 6
18192 TCTTTTTTCG
* * * **
18202 CTTTTT CTTTTT CAATTTT CTTTTCTT CATTTT CTTTTT CTCTCA CTTTTT
1 CTTTTT CTTTTT C-TTTTT C-TTT-TT CTTTTT CTTTTT CTTTTT CTTTTT
* * ** *
18253 -TGATTT CTTTTT CTTTTG CAATTT CTTTTT CTTTTT CGTTTT CTTTTT
1 CT-TTTT CTTTTT CTTTTT CTTTTT CTTTTT CTTTTT CTTTTT CTTTTT
*
18301 -GTTTT CTTT
1 CTTTTT CTTT
18310 CAATTTCTTT
Statistics
Matches: 74, Mismatches: 23, Indels: 10
0.69 0.21 0.09
Matches are distributed among these distances:
5 5 0.07
6 56 0.76
7 10 0.14
8 3 0.04
ACGTcount: A:0.06, C:0.18, G:0.04, T:0.72
Consensus pattern (6 bp):
CTTTTT
Found at i:19010 original size:10 final size:10
Alignment explanation
Indices: 18995--19032 Score: 51
Period size: 10 Copynumber: 3.8 Consensus size: 10
18985 GCTCGATTCC
*
18995 AGCTCACTCG
1 AGCTCAATCG
19005 AGCTCAAGTC-
1 AGCTCAA-TCG
19015 AGCTCAATCG
1 AGCTCAATCG
19025 AGCTCAAT
1 AGCTCAAT
19033 TTAGCTACAA
Statistics
Matches: 25, Mismatches: 1, Indels: 4
0.83 0.03 0.13
Matches are distributed among these distances:
9 2 0.08
10 21 0.84
11 2 0.08
ACGTcount: A:0.29, C:0.32, G:0.18, T:0.21
Consensus pattern (10 bp):
AGCTCAATCG
Found at i:19019 original size:20 final size:20
Alignment explanation
Indices: 18994--19031 Score: 67
Period size: 20 Copynumber: 1.9 Consensus size: 20
18984 AGCTCGATTC
*
18994 CAGCTCACTCGAGCTCAAGT
1 CAGCTCAATCGAGCTCAAGT
19014 CAGCTCAATCGAGCTCAA
1 CAGCTCAATCGAGCTCAA
19032 TTTAGCTACA
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
20 17 1.00
ACGTcount: A:0.29, C:0.34, G:0.18, T:0.18
Consensus pattern (20 bp):
CAGCTCAATCGAGCTCAAGT
Found at i:19038 original size:20 final size:20
Alignment explanation
Indices: 18995--19055 Score: 63
Period size: 20 Copynumber: 3.0 Consensus size: 20
18985 GCTCGATTCC
* * *
18995 AGCTCACTCGAGCTCAAGTC
1 AGCTCAATCGAGCTCAATTT
19015 AGCTCAATCGAGCTCAATTT
1 AGCTCAATCGAGCTCAATTT
19035 AGCTACAATTC-AGCTC-ATTT
1 AGCT-CAA-TCGAGCTCAATTT
19055 A
1 A
19056 TTTTATTGGT
Statistics
Matches: 36, Mismatches: 3, Indels: 4
0.84 0.07 0.09
Matches are distributed among these distances:
20 26 0.72
21 8 0.22
22 2 0.06
ACGTcount: A:0.30, C:0.28, G:0.15, T:0.28
Consensus pattern (20 bp):
AGCTCAATCGAGCTCAATTT
Found at i:19049 original size:11 final size:10
Alignment explanation
Indices: 19005--19051 Score: 51
Period size: 10 Copynumber: 4.6 Consensus size: 10
18995 AGCTCACTCG
*
19005 AGCTCAAGTC
1 AGCTCAATTC
19015 AGCTCAA-TC
1 AGCTCAATTC
*
19024 GAGCTCAATTT
1 -AGCTCAATTC
19035 AGCTACAATTC
1 AGCT-CAATTC
19046 AGCTCA
1 AGCTCA
19052 TTTATTTTAT
Statistics
Matches: 32, Mismatches: 2, Indels: 6
0.80 0.05 0.15
Matches are distributed among these distances:
9 2 0.06
10 20 0.62
11 10 0.31
ACGTcount: A:0.32, C:0.28, G:0.15, T:0.26
Consensus pattern (10 bp):
AGCTCAATTC
Found at i:20393 original size:13 final size:13
Alignment explanation
Indices: 20344--20392 Score: 80
Period size: 13 Copynumber: 3.7 Consensus size: 13
20334 ATAGGTGCGT
20344 AAAAAAATTAAAAA
1 AAAAAAATT-AAAA
20358 AAAAAAATTAAAA
1 AAAAAAATTAAAA
*
20371 AAAAAAATTGAAA
1 AAAAAAATTAAAA
20384 AAAAAAATT
1 AAAAAAATT
20393 GCATACGGTT
Statistics
Matches: 34, Mismatches: 1, Indels: 1
0.94 0.03 0.03
Matches are distributed among these distances:
13 25 0.74
14 9 0.26
ACGTcount: A:0.82, C:0.00, G:0.02, T:0.16
Consensus pattern (13 bp):
AAAAAAATTAAAA
Found at i:20442 original size:1 final size:1
Alignment explanation
Indices: 20436--20464 Score: 58
Period size: 1 Copynumber: 29.0 Consensus size: 1
20426 AAAGATCCGT
20436 AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
20465 GAGTCTGGAG
Statistics
Matches: 28, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
1 28 1.00
ACGTcount: A:1.00, C:0.00, G:0.00, T:0.00
Consensus pattern (1 bp):
A
Found at i:21475 original size:21 final size:22
Alignment explanation
Indices: 21451--21499 Score: 64
Period size: 21 Copynumber: 2.2 Consensus size: 22
21441 AGTACGAGCG
21451 AGAAAAAGAAATCG-AAAGAAA
1 AGAAAAAGAAATCGAAAAGAAA
* *
21472 AGAAAAAGAGATTGAAAAAGAAA
1 AGAAAAAGAAATCG-AAAAGAAA
21495 AGAAA
1 AGAAA
21500 TCCAAAAAGA
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
21 12 0.50
23 12 0.50
ACGTcount: A:0.71, C:0.02, G:0.20, T:0.06
Consensus pattern (22 bp):
AGAAAAAGAAATCGAAAAGAAA
Found at i:23219 original size:10 final size:10
Alignment explanation
Indices: 23204--23241 Score: 51
Period size: 10 Copynumber: 3.8 Consensus size: 10
23194 GCTCGATTCC
*
23204 AGCTCACTCG
1 AGCTCAATCG
23214 AGCTCAAGTC-
1 AGCTCAA-TCG
23224 AGCTCAATCG
1 AGCTCAATCG
23234 AGCTCAAT
1 AGCTCAAT
23242 TTAGCTACAA
Statistics
Matches: 25, Mismatches: 1, Indels: 4
0.83 0.03 0.13
Matches are distributed among these distances:
9 2 0.08
10 21 0.84
11 2 0.08
ACGTcount: A:0.29, C:0.32, G:0.18, T:0.21
Consensus pattern (10 bp):
AGCTCAATCG
Found at i:23228 original size:20 final size:20
Alignment explanation
Indices: 23203--23240 Score: 67
Period size: 20 Copynumber: 1.9 Consensus size: 20
23193 AGCTCGATTC
*
23203 CAGCTCACTCGAGCTCAAGT
1 CAGCTCAATCGAGCTCAAGT
23223 CAGCTCAATCGAGCTCAA
1 CAGCTCAATCGAGCTCAA
23241 TTTAGCTACA
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
20 17 1.00
ACGTcount: A:0.29, C:0.34, G:0.18, T:0.18
Consensus pattern (20 bp):
CAGCTCAATCGAGCTCAAGT
Found at i:23247 original size:20 final size:20
Alignment explanation
Indices: 23204--23264 Score: 63
Period size: 20 Copynumber: 3.0 Consensus size: 20
23194 GCTCGATTCC
* * *
23204 AGCTCACTCGAGCTCAAGTC
1 AGCTCAATCGAGCTCAATTT
23224 AGCTCAATCGAGCTCAATTT
1 AGCTCAATCGAGCTCAATTT
23244 AGCTACAATTC-AGCTC-ATTT
1 AGCT-CAA-TCGAGCTCAATTT
23264 A
1 A
23265 TTTTATTGGT
Statistics
Matches: 36, Mismatches: 3, Indels: 4
0.84 0.07 0.09
Matches are distributed among these distances:
20 26 0.72
21 8 0.22
22 2 0.06
ACGTcount: A:0.30, C:0.28, G:0.15, T:0.28
Consensus pattern (20 bp):
AGCTCAATCGAGCTCAATTT
Found at i:23258 original size:11 final size:10
Alignment explanation
Indices: 23214--23260 Score: 51
Period size: 10 Copynumber: 4.6 Consensus size: 10
23204 AGCTCACTCG
*
23214 AGCTCAAGTC
1 AGCTCAATTC
23224 AGCTCAA-TC
1 AGCTCAATTC
*
23233 GAGCTCAATTT
1 -AGCTCAATTC
23244 AGCTACAATTC
1 AGCT-CAATTC
23255 AGCTCA
1 AGCTCA
23261 TTTATTTTAT
Statistics
Matches: 32, Mismatches: 2, Indels: 6
0.80 0.05 0.15
Matches are distributed among these distances:
9 2 0.06
10 20 0.62
11 10 0.31
ACGTcount: A:0.32, C:0.28, G:0.15, T:0.26
Consensus pattern (10 bp):
AGCTCAATTC
Done.