Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold255
Parameters: 2 7 7 80 10 50 1000
Length:  37177

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2336--2372
12
3.0
13
80
15
51
40
5
24
29
1.77
5743--5796
21
2.6
20
77
8
63
40
7
9
42
1.65
5775--6158
17
21.8
17
70
14
160
42
11
11
33
1.79
5773--6063
35
8.3
34
76
9
153
41
12
11
34
1.79
5912--6139
54
4.2
54
75
11
148
42
11
12
33
1.78
5932--6139
36
5.8
36
77
7
167
42
11
12
34
1.78
5912--6158
36
6.9
35
75
8
157
42
11
12
33
1.78
6734--6760
11
2.5
11
100
0
54
22
7
0
70
1.12
6762--6806
14
3.3
14
84
12
58
0
24
0
75
0.80
7352--7468
30
3.9
30
80
7
105
45
3
21
29
1.68
7367--7468
30
3.4
30
86
2
134
45
3
21
29
1.70
7464--7500
15
2.4
16
90
4
58
24
0
2
72
0.97
7466--7500
16
2.2
16
89
0
52
20
0
2
77
0.90
10375--10422
25
1.9
25
100
0
96
35
2
12
50
1.52
12165--12213
22
2.2
23
78
10
57
40
12
12
34
1.80
13681--13731
26
2.0
26
88
0
75
52
1
13
31
1.51
14937--14967
14
2.2
14
94
0
53
38
9
19
32
1.84
15377--15475
27
3.6
27
70
20
96
13
14
21
51
1.75
17543--17600
26
2.2
26
96
0
107
34
12
10
43
1.76
17921--17997
14
5.0
15
71
20
52
42
15
9
32
1.78
17937--17976
20
2.0
20
90
0
62
50
12
10
27
1.72
17925--17991
34
1.9
35
90
3
109
46
13
8
31
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17960--17999
14
2.9
14
84
0
53
42
17
7
32
1.77
28103--28204
28
3.6
28
93
0
159
36
10
23
29
1.89
31222--31266
20
2.3
20
88
3
65
28
17
26
26
1.98
32552--32726
46
3.8
45
79
11
203
21
20
29
28
1.98
32549--32718
92
1.8
93
93
1
297
21
21
30
27
1.98
35663--35720
15
3.7
15
88
6
89
12
15
10
62
1.55

Tables:   1

The End!