Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2442
Parameters: 2 7 7 80 10 50 1000
Length:  38983

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8301--8436
18
7.9
17
75
16
102
49
11
11
28
1.72
8301--8437
35
4.0
35
78
5
136
48
10
10
29
1.72
8302--8461
17
9.2
17
76
12
128
49
10
11
28
1.73
8415--8840
219
1.9
218
81
8
499
36
11
12
38
1.80
8635--8681
20
2.5
19
77
16
53
44
8
17
29
1.78
8674--8720
24
2.0
24
84
8
62
29
2
10
57
1.44
9041--9109
11
6.3
11
82
11
79
0
20
0
79
0.73
9043--9107
12
5.3
13
71
14
50
0
18
0
81
0.69
9368--9436
17
3.9
18
76
16
56
0
27
0
72
0.85
9369--9440
3
24.0
3
78
16
62
0
29
0
70
0.87
9368--9440
13
5.5
13
80
12
60
0
28
0
71
0.87
9368--9439
10
7.2
10
76
16
69
0
27
0
72
0.85
9806--9907
30
3.4
29
75
12
91
45
1
23
29
1.64
9821--9915
30
3.2
30
84
3
129
45
3
23
28
1.68
12699--12742
19
2.2
21
80
15
58
11
27
4
56
1.53
17653--17693
16
2.3
19
84
16
61
78
0
12
9
0.98
18901--18944
21
2.0
21
82
4
52
29
4
11
54
1.56
19312--19381
34
2.1
34
86
5
97
38
11
17
32
1.85
28390--28450
15
4.1
15
73
10
54
24
3
8
63
1.37

Tables:   1

The End!