Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1540
Parameters: 2 7 7 80 10 50 1000
Length:  41516

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4364--4476
27
4.2
28
84
5
144
33
19
24
22
1.97
4364--4477
55
2.1
54
87
6
169
34
19
24
21
1.96
10385--10414
16
1.9
15
93
6
51
33
23
0
43
1.54
12456--12637
39
4.7
39
85
4
156
21
24
28
25
1.99
12511--12637
39
3.3
39
90
0
200
22
25
27
23
2.00
12472--12652
78
2.3
78
82
3
222
23
23
27
25
2.00
15353--15381
4
7.2
4
100
0
58
75
0
24
0
0.80
18050--18254
40
5.2
40
86
2
272
26
26
21
25
1.99
31306--31465
57
2.8
56
79
1
176
30
20
6
42
1.78
34047--34223
27
6.6
26
80
7
169
26
15
29
28
1.96
34048--34203
82
1.9
81
85
6
217
26
16
29
28
1.96
34047--34223
55
3.3
53
82
7
205
26
15
29
28
1.96

Tables:   1

The End!