Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2798
Parameters: 2 7 7 80 10 50 1000
Length:  31127

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10828--11094
70
3.8
70
83
8
337
29
15
19
34
1.93
11247--11386
71
2.0
71
85
2
192
22
17
24
35
1.96
11469--11524
25
2.2
25
83
6
67
33
14
7
44
1.72
11498--11694
73
2.7
72
92
4
315
31
17
18
31
1.95
12870--12917
10
5.1
9
80
16
53
81
4
2
12
0.93
12889--12913
8
3.1
8
100
0
50
88
0
0
12
0.53
12882--12917
18
2.0
18
89
10
56
83
2
0
13
0.76
13020--13059
11
3.6
11
83
12
55
0
52
0
47
1.00
13021--13074
22
2.3
23
84
6
65
0
48
0
51
1.00
13532--13568
3
12.3
3
100
0
74
32
0
0
67
0.91
13541--13778
127
1.9
129
83
7
315
31
5
5
57
1.46
16427--16462
19
1.9
19
88
5
56
50
0
0
50
1.00
19146--19174
13
2.2
13
100
0
58
31
6
0
62
1.22
25011--25146
40
3.4
40
84
4
168
27
16
27
27
1.97
27981--28148
40
4.2
40
83
4
106
25
27
23
23
2.00
28004--28148
40
3.6
40
85
4
193
23
26
24
25
2.00

Tables:   1

The End!