Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2040
Parameters: 2 7 7 80 10 50 1000
Length:  14688

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1312--1560
50
4.8
50
85
4
284
20
29
24
26
1.99
1311--1560
100
2.4
104
88
6
357
20
29
24
26
1.99
1655--1686
13
2.5
13
94
0
55
56
12
0
31
1.37
1898--1955
30
1.9
30
89
0
89
31
24
3
41
1.71
8904--9152
50
4.8
50
85
4
284
20
29
24
26
1.99
8903--9152
100
2.4
104
88
6
357
20
29
24
26
1.99
9247--9278
13
2.5
13
94
0
55
56
12
0
31
1.37
9490--9547
30
1.9
30
89
0
89
31
24
3
41
1.71
11371--11402
6
5.7
6
92
7
50
0
15
0
84
0.63

Tables:   1

The End!