Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1379
Parameters: 2 7 7 80 10 50 1000
Length:  17041

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3581--3644
20
3.2
20
86
6
87
32
12
21
32
1.91
3694--3814
23
5.3
23
80
11
133
28
18
25
28
1.98
3694--3800
47
2.3
45
87
9
146
28
20
24
27
1.99
3694--3838
47
3.1
47
82
12
142
26
19
25
28
1.99
3871--4027
41
3.6
42
77
15
151
31
24
21
22
1.98
3865--4028
21
7.5
21
71
20
115
31
24
21
22
1.99
4105--4148
20
2.2
20
84
8
54
29
22
13
34
1.93

Tables:   1

The End!