Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1675
Parameters: 2 7 7 80 10 50 1000
Length:  36615

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6658--6823
38
4.3
38
93
3
262
34
24
19
21
1.96
10137--10248
27
4.2
26
82
7
125
38
22
23
16
1.93
11465--11548
39
2.2
36
83
12
98
64
0
32
3
1.11
12392--12473
37
2.2
37
81
14
98
64
0
31
3
1.11
12392--12473
36
2.2
36
83
12
96
64
0
31
3
1.11
17957--17999
19
2.3
19
80
11
54
62
2
4
30
1.28
21610--21652
17
2.6
16
82
17
61
30
0
2
67
1.03
21610--21651
15
2.6
15
85
14
57
30
0
2
66
1.04
22161--22186
11
2.4
11
100
0
52
7
38
7
46
1.61
25196--25237
15
2.7
16
82
14
52
45
0
2
52
1.13
25187--25228
15
2.9
15
82
10
52
47
0
0
52
1.00
25340--25374
18
2.0
17
88
5
52
45
0
0
54
0.99
25171--25480
157
2.0
157
95
0
557
48
4
2
44
1.35
25610--25677
16
4.2
16
96
0
127
38
35
1
25
1.65
26963--26996
16
2.1
16
88
0
50
50
14
17
17
1.79
29795--29835
21
2.0
21
90
0
64
29
21
29
19
1.98
34574--34606
16
2.1
16
94
0
57
42
12
3
42
1.57

Tables:   1

The End!