Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3686
Parameters: 2 7 7 80 10 50 1000
Length:  37939

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1366--1537
93
1.8
93
94
0
308
27
30
21
20
1.98
1358--1533
46
3.8
46
81
10
214
28
29
21
21
1.98
3901--3984
29
2.9
29
82
10
100
57
15
16
10
1.65
3897--3975
15
5.4
15
80
10
92
59
12
17
10
1.60
3908--3984
15
5.2
15
80
9
79
57
14
16
11
1.66
6902--7063
46
3.5
46
72
8
157
29
28
20
22
1.98
11916--11974
28
2.0
30
83
6
77
32
20
3
44
1.68
18977--19053
27
2.9
27
86
0
91
27
16
22
33
1.95
19018--19305
27
10.7
27
84
3
296
34
11
17
36
1.86
19622--19712
28
3.3
28
84
1
112
30
36
13
19
1.90
22528--22604
27
2.9
27
82
0
91
27
15
16
40
1.89
22595--22854
27
9.7
27
81
8
239
33
8
18
40
1.80
22568--22854
54
5.3
54
82
5
314
33
8
17
40
1.80
22568--22854
81
3.6
80
78
10
284
33
8
17
40
1.80
22634--22855
107
2.1
108
85
0
293
34
9
16
40
1.80
24530--24637
27
4.0
27
79
14
107
38
22
23
15
1.92
24530--24637
54
2.0
54
85
3
146
38
22
23
15
1.92
26055--26101
24
2.0
24
91
0
76
23
38
2
36
1.67
29960--30167
40
5.2
40
86
0
274
27
27
20
24
1.99

Tables:   1

The End!