Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2249
Parameters: 2 7 7 80 10 50 1000
Length:  43618

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10710--10881
93
1.8
93
92
0
290
27
29
21
22
1.99
10702--10877
46
3.8
46
79
10
196
28
28
21
22
1.99
10753--10896
46
3.1
44
71
21
116
29
28
20
22
1.98
12824--12868
13
3.4
13
87
6
72
13
6
6
73
1.24
12751--13121
100
3.8
100
81
9
405
26
16
17
39
1.91
13038--13646
75
8.3
75
82
5
744
30
15
20
33
1.94
13038--13646
148
4.1
149
86
4
742
30
15
20
33
1.94
13058--13646
224
2.7
222
90
3
899
30
16
20
32
1.95
13717--13749
14
2.4
14
94
0
57
18
12
6
63
1.48
13615--14089
91
5.3
90
79
7
409
26
17
18
37
1.93
13573--14089
177
2.9
174
78
9
494
27
17
19
35
1.94
14203--14242
21
1.9
21
89
0
62
30
10
30
30
1.90
14775--14873
30
3.3
30
92
0
162
25
49
6
19
1.71
15469--15534
22
2.9
23
82
6
80
30
6
6
57
1.47
15474--15535
24
2.7
23
85
5
81
30
4
6
58
1.44
15598--15653
25
2.3
24
79
14
62
37
16
3
42
1.65
20402--20610
111
1.9
111
81
5
253
24
24
26
24
2.00
25114--25155
22
2.0
21
90
4
66
50
0
0
50
1.00
28961--29030
27
2.6
27
95
2
113
31
28
12
27
1.93
28961--29058
28
3.5
28
90
2
135
31
28
13
26
1.94
32491--32525
18
1.9
18
88
0
52
34
0
5
60
1.21

Tables:   1

The End!