Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1828
Parameters: 2 7 7 80 10 50 1000
Length:  27590

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90--155
15
4.4
16
83
11
86
62
12
15
10
1.55
3043--3217
46
3.8
46
73
13
162
30
26
20
22
1.98
7661--7844
67
2.8
64
77
8
194
28
16
30
23
1.96
10404--10441
19
2.0
19
100
0
76
36
5
15
42
1.70
13138--13162
13
1.9
13
100
0
50
16
36
32
16
1.90
18141--18364
40
5.6
40
86
3
245
25
20
28
25
1.99
18216--18399
80
2.3
80
84
0
235
26
20
28
25
1.99

Tables:   1

The End!