Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3634
Parameters: 2 7 7 80 10 50 1000
Length:  40769

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5999--6066
29
2.3
29
85
5
93
27
30
13
27
1.94
6168--6246
29
2.7
30
82
13
110
29
30
15
25
1.96
9287--9471
79
2.3
81
83
7
227
24
22
27
24
2.00
9288--9471
40
4.6
40
82
9
207
25
22
27
24
2.00
9340--9494
79
2.0
79
83
7
199
26
21
27
25
1.99
13411--13446
17
2.1
17
94
0
63
58
2
5
33
1.36
15414--15460
20
2.3
20
77
0
58
36
19
23
21
1.95
17173--17218
17
2.7
16
80
12
56
8
30
0
60
1.26
17209--17284
6
12.2
6
75
8
71
6
21
0
72
1.07
17159--17273
18
6.3
19
79
8
87
8
24
0
66
1.19
18194--18242
19
2.6
19
93
0
80
24
10
0
65
1.23
19868--19903
10
3.6
10
92
0
54
44
13
19
22
1.86
20581--20714
56
2.4
56
88
0
187
29
14
21
34
1.93
23941--24123
66
2.8
63
75
16
169
28
17
30
24
1.97
28765--28865
46
2.2
46
84
7
134
37
13
22
25
1.92
30792--30846
11
5.5
10
75
12
51
38
10
16
34
1.84
30893--30958
25
2.6
25
95
0
114
25
27
22
24
2.00

Tables:   1

The End!