Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2870
Parameters: 2 7 7 80 10 50 1000
Length:  35832

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
310--830
47
11.0
47
91
4
743
33
9
29
27
1.89
486--562
22
3.3
22
65
25
59
31
11
31
25
1.92
676--797
22
5.3
22
61
18
59
33
11
29
25
1.91
4420--4464
20
2.2
20
88
0
63
35
13
2
48
1.54
13780--13952
46
3.7
46
78
10
199
21
19
27
31
1.97
13777--13947
93
1.8
93
92
0
288
21
19
28
30
1.97
14177--14214
19
2.0
20
85
15
53
36
0
23
39
1.55
19158--19516
47
7.6
47
92
1
556
29
29
8
32
1.87
19158--19516
96
3.8
95
90
3
517
29
29
8
32
1.87
23140--23494
40
9.1
40
86
5
483
25
28
21
24
1.99
23153--23494
116
2.9
120
88
4
457
25
28
21
24
1.99
23153--23494
156
2.2
157
88
4
505
25
28
21
24
1.99

Tables:   1

The End!