Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3127
Parameters: 2 7 7 80 10 50 1000
Length:  37027

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1282--1375
10
9.4
10
74
13
59
79
2
11
6
0.99
1301--1367
18
3.5
19
78
13
66
83
1
10
4
0.85
1281--1375
20
4.8
20
78
10
95
80
2
11
6
0.99
2436--2492
14
4.2
13
75
16
53
71
1
17
8
1.19
2435--2472
13
2.8
13
82
17
51
73
0
18
7
1.06
5782--5827
17
2.7
17
86
0
74
82
4
2
10
0.89
5833--5863
8
3.9
8
91
0
53
93
0
6
0
0.35
5833--5865
16
2.1
16
100
0
66
93
0
6
0
0.33
5816--5864
25
2.0
25
87
0
71
87
2
8
2
0.69
5817--5865
12
3.8
12
77
17
53
87
2
8
2
0.69
5816--5866
27
1.9
27
88
4
77
86
1
9
1
0.73
6850--6941
17
5.4
17
74
14
73
68
4
19
7
1.31
6880--6998
12
9.6
12
72
16
66
71
4
18
5
1.23
6884--6986
18
5.6
18
73
7
73
70
3
18
6
1.25
6880--6986
6
17.7
6
69
8
65
71
3
18
6
1.24
6947--6984
13
2.8
13
82
17
51
73
0
18
7
1.06
6948--6998
21
2.4
21
74
6
50
74
1
17
5
1.11
7001--7063
33
1.9
33
84
12
85
53
6
26
12
1.62
12216--12249
11
3.0
12
87
12
54
17
5
0
76
0.98
12220--12248
10
2.7
11
94
5
51
13
3
0
82
0.79
12217--12260
22
2.0
22
81
0
52
18
9
2
70
1.24
12497--12540
22
2.0
22
90
0
70
34
2
36
27
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15344--15377
12
2.8
12
90
4
50
64
0
23
11
1.26
15884--17481
809
2.0
812
96
2
3000
28
16
20
34
1.94
22141--22192
20
2.5
20
84
6
70
36
1
1
59
1.19
22782--22815
16
2.1
17
88
5
52
35
14
2
47
1.60
28352--28420
30
2.3
31
90
7
106
33
17
13
36
1.88
35066--35103
18
2.1
19
90
5
60
52
5
21
21
1.66

Tables:   1

The End!