Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold395
Parameters: 2 7 7 80 10 50 1000
Length:  63185

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7020--7149
40
3.3
39
88
3
188
28
27
20
23
1.99
7023--7201
79
2.3
79
82
9
206
26
27
21
24
1.99
14901--15047
40
3.7
40
83
5
120
25
27
21
25
2.00
14947--15127
80
2.3
80
83
9
219
27
27
20
23
1.99
14944--15127
40
4.6
40
81
7
196
28
27
20
23
1.99
18907--18967
27
2.3
27
88
0
86
31
21
16
31
1.95
19631--19680
23
2.2
23
88
0
73
40
8
28
24
1.83
25208--25244
19
1.9
19
89
10
58
5
16
13
64
1.45
26506--26563
27
2.1
27
90
0
89
27
17
18
36
1.94
30810--30859
26
1.9
26
100
0
100
32
14
12
42
1.82
35824--36068
49
4.9
49
80
3
274
30
26
17
24
1.97
35835--36061
100
2.3
98
82
3
258
31
27
17
23
1.97
54977--55367
48
8.1
48
95
1
701
36
5
27
30
1.81
56840--57241
40
10.1
40
85
0
480
23
20
28
27
1.99
56843--57243
80
5.0
80
86
0
559
23
20
28
27
1.99
57403--57453
25
2.0
25
81
7
59
33
13
31
21
1.92
57450--57540
28
3.2
27
78
9
101
20
17
30
30
1.96
60895--61141
48
5.1
48
93
1
422
36
5
27
30
1.80
60895--61138
98
2.5
98
93
1
420
36
5
27
30
1.80
61292--61396
37
2.8
37
91
0
165
25
18
27
28
1.98
61441--61771
47
7.0
48
92
3
532
35
4
28
31
1.78

Tables:   1

The End!