Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2709
Parameters: 2 7 7 80 10 50 1000
Length:  28570

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4439--4619
40
4.5
40
88
4
240
29
27
19
23
1.98
4429--4635
40
5.2
40
89
1
168
28
26
19
24
1.99
9138--9278
40
3.5
40
82
8
153
30
26
18
24
1.98
9128--9294
40
4.2
40
82
3
151
30
25
18
25
1.98
11988--12168
40
4.5
40
86
7
224
29
28
18
23
1.98
12057--12184
40
3.2
40
86
2
150
28
25
18
27
1.98
16675--16815
40
3.5
40
86
6
178
29
26
19
24
1.99
24805--24983
40
4.5
40
87
6
213
29
27
18
24
1.98
24795--24989
78
2.5
79
82
5
225
29
27
18
24
1.98
24795--24999
40
5.2
40
88
2
166
28
26
19
24
1.99

Tables:   1

The End!