Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1016
Parameters: 2 7 7 80 10 50 1000
Length:  28609

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1369--1416
15
3.3
15
73
5
53
31
0
25
43
1.55
1363--1422
29
2.1
29
90
0
93
30
0
28
41
1.56
2397--2441
14
3.3
14
78
6
56
48
15
0
35
1.45
4886--4955
24
2.9
24
78
0
77
14
28
0
57
1.38
4907--4955
18
2.7
18
87
0
71
14
26
0
59
1.36
5853--5891
17
2.2
18
86
13
55
10
7
5
76
1.13
6111--6170
29
2.1
29
87
0
84
31
0
26
41
1.56
7147--7191
14
3.3
14
78
6
56
48
15
0
35
1.45
7987--8012
8
3.2
8
100
0
52
38
0
38
23
1.55
10231--10269
18
2.2
18
86
4
62
71
7
7
12
1.29
10276--10323
24
2.0
24
88
8
71
81
4
8
6
0.98
10276--10314
11
3.5
11
89
6
53
84
5
5
5
0.86
13199--13312
6
18.5
6
68
13
63
73
3
15
7
1.18
13203--13311
18
5.8
18
72
12
78
73
3
15
7
1.20
13268--13324
13
4.2
13
73
20
53
73
1
15
8
1.16
13266--13323
14
4.1
15
70
18
52
72
1
17
8
1.18
13267--13324
27
2.1
27
87
6
82
72
1
17
8
1.18
13185--13304
12
10.0
12
69
19
72
71
2
16
9
1.22
16540--16568
13
2.2
13
100
0
58
62
10
0
27
1.28
16779--16818
21
1.9
21
94
0
71
42
15
22
20
1.88
16780--16825
10
4.5
10
81
5
56
41
17
23
17
1.90
27575--27613
13
2.9
14
81
11
55
71
5
7
15
1.26

Tables:   1

The End!