Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2426
Parameters: 2 7 7 80 10 50 1000
Length:  25966

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4276--4567
42
6.9
42
80
9
319
17
28
34
19
1.95
4776--4854
24
3.3
24
85
5
106
6
37
35
20
1.78
4872--5901
43
24.3
43
77
6
740
16
32
33
18
1.93
4859--5872
85
12.0
86
81
4
946
16
32
33
18
1.93
5001--5901
256
3.5
254
84
4
1040
16
32
33
18
1.93
4930--5667
299
2.5
299
91
2
1162
16
32
32
18
1.93
4861--5872
299
3.4
297
84
6
1114
16
32
33
17
1.93
5801--5879
34
2.3
34
93
2
131
7
35
37
18
1.80
5878--5926
25
2.0
25
91
0
80
12
22
46
18
1.82
5914--6006
42
2.2
44
90
3
145
12
27
39
19
1.88
17508--17799
42
6.9
42
80
9
319
17
28
34
19
1.95
18008--18086
24
3.3
24
85
5
106
6
37
35
20
1.78
18104--19133
43
24.3
43
77
6
740
16
32
33
18
1.93
18091--19104
85
12.0
86
81
4
946
16
32
33
18
1.93
18233--19133
256
3.5
254
84
4
1040
16
32
33
18
1.93
18162--18899
299
2.5
299
91
2
1162
16
32
32
18
1.93
18093--19104
299
3.4
297
84
6
1114
16
32
33
17
1.93
19033--19111
34
2.3
34
93
2
131
7
35
37
18
1.80
19110--19158
25
2.0
25
91
0
80
12
22
46
18
1.82
19146--19238
42
2.2
44
90
3
145
12
27
39
19
1.88

Tables:   1

The End!