Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1585
Parameters: 2 7 7 80 10 50 1000
Length:  44101

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5137--5179
22
2.0
21
81
4
50
37
6
13
41
1.72
5870--6052
79
2.3
81
83
7
223
24
21
27
26
1.99
5871--6054
40
4.6
39
79
9
185
24
21
28
26
1.99
5923--6087
79
2.1
79
82
6
192
26
20
27
26
1.99
12626--12794
44
3.6
46
76
14
141
23
30
19
27
1.98
12626--12893
94
2.9
94
76
13
250
23
28
18
29
1.98
12626--12891
47
5.7
45
72
15
168
23
28
18
29
1.97
24911--24952
22
2.0
21
86
9
59
28
7
4
59
1.44
29382--29500
46
2.6
46
82
6
143
25
30
18
26
1.98
31696--31770
36
2.1
36
97
0
141
52
17
8
22
1.71
33867--34090
104
2.2
104
93
1
378
31
31
19
17
1.95
34419--34482
30
2.2
29
81
10
76
29
28
6
35
1.82
34426--34482
30
1.9
30
85
3
80
29
24
7
38
1.82

Tables:   1

The End!