Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1729
Parameters: 2 7 7 80 10 50 1000
Length:  44368

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1834--1968
40
3.5
40
88
6
172
20
25
29
24
1.99
4136--4312
27
6.6
27
83
5
196
29
28
14
26
1.95
4136--4312
54
3.3
54
84
4
223
29
28
14
26
1.95
12351--12528
27
6.6
27
85
3
205
29
29
14
26
1.95
12351--12528
54
3.3
54
85
3
232
29
29
14
26
1.95
12372--12527
81
1.9
82
88
3
235
29
29
14
26
1.95
20603--20776
27
6.6
26
79
9
156
29
28
14
27
1.96
20603--20776
54
3.3
54
84
4
212
29
28
14
27
1.96
20624--20775
81
1.9
78
89
4
232
29
28
15
26
1.96
26319--26455
42
3.3
42
81
4
168
28
23
23
24
2.00
33392--33465
29
2.6
29
86
4
96
27
16
31
25
1.96
38269--38432
47
3.6
45
74
16
153
29
18
29
22
1.98
38314--38479
47
3.7
46
77
12
157
28
18
30
22
1.97
38268--38434
88
1.9
88
89
7
259
29
18
29
22
1.98
38261--38484
47
4.9
46
70
19
141
29
18
29
23
1.97

Tables:   1

The End!