Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1874
Parameters: 2 7 7 80 10 50 1000
Length:  37183

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
181--381
38
5.2
39
78
14
177
23
28
21
25
1.99
181--328
75
1.9
78
85
10
207
23
29
20
25
1.99
207--381
79
2.3
77
79
13
191
23
29
21
25
1.99
8034--8258
40
5.7
40
86
5
278
25
27
21
25
2.00
8034--8258
119
1.9
120
83
6
296
25
27
21
25
2.00
16749--16784
16
2.2
16
90
0
54
50
13
25
11
1.75
16995--17118
29
4.4
28
80
2
131
28
14
27
29
1.95
17819--17844
5
5.2
5
100
0
52
19
0
0
80
0.71
19449--19601
54
2.8
54
83
0
171
31
24
9
34
1.87
19476--19605
27
4.8
27
85
0
161
30
24
8
36
1.85
19598--19869
27
10.0
27
75
8
196
39
18
10
31
1.84
19598--19831
81
2.9
81
83
9
282
41
18
9
30
1.82
19907--19984
27
2.9
27
77
11
88
35
21
20
21
1.96
21141--21188
25
1.9
25
86
0
69
33
25
16
25
1.96
21225--21295
20
3.5
20
90
0
106
36
11
18
33
1.86
21342--21484
25
5.8
25
93
2
229
27
20
23
27
1.99
21341--21510
25
7.0
24
88
5
211
28
21
22
27
1.99
21704--21767
31
2.1
31
90
0
101
35
15
23
25
1.94
27505--27674
43
4.0
43
73
7
141
25
15
26
32
1.96
29446--29483
19
2.0
20
85
15
53
39
23
0
36
1.55
29708--29881
46
3.8
49
78
15
174
29
27
20
22
1.99
29713--29881
93
1.8
91
93
2
293
28
28
20
21
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29707--29890
44
4.0
46
72
20
152
29
28
19
22
1.98

Tables:   1

The End!