Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2962
Parameters: 2 7 7 80 10 50 1000
Length:  23850

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5090--5292
40
5.1
41
76
10
174
26
27
21
25
1.99
7418--7443
7
3.7
7
100
0
52
15
11
0
73
1.11
8713--8757
8
5.6
8
86
0
63
44
20
22
13
1.85
8713--8763
16
3.2
16
85
0
66
45
17
21
15
1.86
8704--8766
16
4.0
16
79
6
58
46
19
20
14
1.84
8994--9094
29
3.6
29
83
4
116
25
16
28
28
1.97
11983--12014
16
1.9
17
93
6
57
53
31
6
9
1.58
13183--13237
16
3.4
16
84
0
65
49
18
20
12
1.79
13465--13537
29
2.6
28
88
2
101
26
16
30
27
1.97
13452--13537
28
3.0
28
83
3
109
27
15
29
27
1.96
16426--16462
16
2.2
17
90
4
58
54
29
2
13
1.53

Tables:   1

The End!