Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold633
Parameters: 2 7 7 80 10 50 1000
Length:  41496

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1102--1159
19
2.8
20
80
19
66
60
1
22
15
1.44
4145--4169
12
2.1
12
100
0
50
48
8
12
32
1.69
5622--5673
20
2.6
19
77
16
61
36
11
26
25
1.90
5621--5685
20
3.3
19
69
16
51
36
9
27
26
1.87
10137--10171
12
2.8
12
95
4
61
14
2
5
77
1.07
11672--11718
20
2.3
20
85
0
67
21
12
36
29
1.91
12199--12275
12
6.4
12
74
16
70
62
1
23
12
1.38
18247--18312
31
2.1
31
83
10
82
6
15
4
74
1.18
18266--18356
11
7.6
11
75
19
58
9
10
4
74
1.19
18246--18356
37
3.2
36
77
14
94
10
11
4
72
1.24
18329--18356
10
2.8
10
100
0
56
10
0
7
82
0.85
24905--24945
15
2.7
15
100
0
82
17
12
4
65
1.42
24977--25013
12
2.8
14
84
16
60
16
0
8
75
1.02
24982--25013
12
2.7
12
100
0
64
12
0
6
81
0.87
26008--26054
23
2.1
23
84
7
62
51
12
4
31
1.59
29615--29668
11
4.7
11
86
6
72
70
5
3
20
1.23
29615--29666
12
4.3
12
85
7
70
73
5
3
17
1.19
29615--29666
23
2.2
23
93
3
86
73
5
3
17
1.19

Tables:   1

The End!